Pilot project to elucidate the role of DDX60L in Ebola virus disease

NIH RePORTER · AI · R03 · $183,875 · view on reporter.nih.gov ↗

Abstract

SUMMARY Preliminary Data, based on siRNA knockdown studies, suggests that host encoded DExD/H box family protein DDX60L exerts anti-Ebola virus (EBOV) activity. We therefore hypothesize that DDX60L is a negative regulator of EBOV replication that can influence EBOV disease (EVD). While constitutively expressed in a number of cell types, DXX60L is an interferon (IFN) stimulated gene (ISG) and is related to DDX60, which is reported to augment production of IFNα/β. Therefore, DDX60L may also contribute to the anti-EBOV effects of IFNs and promote upregulation of IFN responses. As a negative regulator of infection, understanding the mechanisms of DDX60L-mediated inhibition may suggest strategies to mitigate EVD. We proposed to define how DDX60L exerts its anti-EBOV effects using a combination of siRNA knockdown and CRISPR-Cas9-based approaches. Studies will be performed in cell lines that correspond to cell types infected by EBOV in vivo. These are the Huh7 (hepatocyte), A549 (epithelial) and THP-1 (monocyte/macrophage) cell lines. Because siRNA knockdown measurably impairs EBOV growth in cell culture, we will use this approach to define effects on a transfection- based EBOV replication cycle modeling system that can assay all the major steps in the virus replication cycle. In parallel, we will use in knockdown studies a recombinant EBOV in which the viral VP30 coding sequences have been replaced with GFP (EBOV-GFPΔVP30). This virus only replicates in cells that provide VP30 in trans, and can be used at reduced biocontainment levels. Finally, we will assay the effects of knockdown in the context of fully replication competent EBOV. For each system, we will perform assays in the absence and presence of IFNα and define steps in the replication cycle affected by knockdown using a combination of approaches that include measuring viral RNA synthesis, viral protein production and host IFNα/β responses. We will also build additional experimental systems to further characterize

Key facts

NIH application ID
11282275
Project number
1R03AI196368-01
Recipient
ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI
Principal Investigator
Christopher F Basler
Activity code
R03
Funding institute
AI
Fiscal year
2026
Award amount
$183,875
Award type
1
Project period
2026-05-01T00:00:00 → 2027-04-30T00:00:00