Exploiting Natural Post-Integration Barriers to Restrict HIV-1 Replication

NIH RePORTER · NIH · R21 · $203,222 · view on reporter.nih.gov ↗

Abstract

PROJECT SUMMARY/ABSTRACT The Berlin patient demonstrates that cure of HIV is possible, and the likely mechanism of cure (transplantation with CCR5∆32 cells) suggests that cell-intrinsic resistance represents a potential therapeutic scenario for a full or functional cure for HIV/AIDS. For several years, we have studied natural, cell-intrinsic barriers to HIV-1 gene expression in cells derived from mice and other rodents. Two of these barriers map to genes encoding host proteins Cyclin T1 (CCNT1) and Exportin-1 (XPO1, also known as CRM1) that are essential regulators of HIV-1 gene expression and latency reversal. In human cells, CCNT1 interacts with the viral Tat protein to promote HIV transcriptional elongation, while XPO1 is bound by the viral Rev protein to mediate nuclear export of intron-containing viral mRNAs and the viral RNA genome. In mouse cells, Tat-Ccnt1 and Rev-Xpo1 interactions are inefficient due to species-specific differences between mouse and human orthologues of either protein. Why these highly conserved genes evolved differences in the rodent and primate lineages is unknown, and the rise of CRISPR/Cas9 technology provides us with the unprecedented opportunity to test the hypothesis that knocking-in mouse-specific features of CCNT1 and XPO1 into human T cells will suppress HIV-1 replication in vitro and in vivo with little net impact on host cellular biology. Indeed, our project is premised on exciting preliminary data showing that modifying a single species-specific codon of human CCNT1 in a human T cell line is sufficient to abolish HIV-1 Tat activity and viral replication, with no discernable effects on cell proliferation. Herein we request support for collaborative studies between the Sherer and Kumar labs to further our studies of mouse-informed CCNT1 and XPO1 gene modifications in human T cells, and to determine the potential of targeting these genes as a resistance/treatment strategy for HIV-1.

Key facts

NIH application ID
9827529
Project number
5R21AI143800-02
Recipient
UNIVERSITY OF WISCONSIN-MADISON
Principal Investigator
Priti Kumar
Activity code
R21
Funding institute
NIH
Fiscal year
2020
Award amount
$203,222
Award type
5
Project period
2018-11-21 → 2021-10-31