OSCILLATORY GENE EXPRESSION AND THE MAINTENANCE OF TEMPORAL PATTERNING

NIH RePORTER · NIH · R01 · $403,200 · view on reporter.nih.gov ↗

Abstract

 DESCRIPTION (provided by applicant): Animal development requires an extreme amount of precision to properly control gene expression. Mutations that alter the accuracy of these processes result in a variety of human diseases including cancer. The fidelity of developmental gene regulation is determined, in part, by turning genes on or off at the right times in relation t the expression of other genes. How this is accomplished at the molecular level remains unknown. Furthermore, our understanding about how the regulatory systems that maintain the continuity of developmental process in constantly changing environmental conditions is limited. The proposed studies seek to determine how oscillatory patterns of gene expression confer stability to developmental systems. This knowledge will provide the opportunity to determine if perturbations of this system are linked to disease and may offer potential prospects for intervention. The broad goal of this project is to use the C. elegans model system to understand the genetic and molecular mechanisms that mediate precise temporal gene regulation. Aims outlined in this proposal build from our identification of two conserved proteins, BLMP-1 and LIN-42, which generate oscillatory expression patterns of downstream target genes (including microRNAs that dictate cell fate specification) and couples these patterns of expression to the molting cycles of post-embryonic development. Experiments outlined in this proposal will determine how this system generates these patterns of expression and tunes microRNA expression levels to maintain homeostasis of temporally regulated genes. In addition, we will determine how this unique regulatory module becomes essential for miRNA gene regulation and the reprograming of temporal patterning when nutrient depravation triggers developmental arrest. Molecular and genetic approaches will be employed to determine the regulatory underpinnings of this system, to define the pervasiveness of temporally dynamic gene expression, and to determine what portions of this regulatory architecture are dependent on blmp-1 and lin-42.

Key facts

NIH application ID
9837447
Project number
5R01GM117406-05
Recipient
COLD SPRING HARBOR LABORATORY
Principal Investigator
CHRISTOPHER Martin HAMMELL
Activity code
R01
Funding institute
NIH
Fiscal year
2020
Award amount
$403,200
Award type
5
Project period
2016-03-01 → 2021-12-31