# Project 3: Fanconi Anemia and Repair of DNA-Protein Crosslinks

> **NIH NIH P01** · UNIVERSITY OF TX MD ANDERSON CAN CTR · 2020 · $55,565

## Abstract

PROJECT SUMMARY 
Fanconi anemia (FA) is a recessive disorder caused by deficient DNA damage repair. FA patients exhibit 
aplastic anemia, congenital abnormalities, and profoundly elevated cancer occurrence. Cells derived from FA 
patients are hypersensitivity to DNA crosslinking agents and highly susceptible to chromosome breakage 
under genotoxic stress. To date, 17 autosomal and 1 X-linked genes are designated as causative genes for 
FA, but the molecular structure of the FA pathway remains largely unclear. Lack of defined genetic model 
systems and a scarcity of recognizable protein domains in most FA proteins are among the major obstacles 
impeding the advance of FA biology. Recent genetic studies in nice revealed an intriguing link between the FA 
pathways and aldehyde metabolism and implicated DNA-protein crosslinks (DPCs) as a physiologically 
relevant endogenous lesion. Many DNA interstrand crosslinking (ICL) agents, such as aldehydes and cisplatin, 
also induce DPCs. Ionizing radiation and UV exposure also generate abundant nuclear DPCs. Therefore, 
DPCs is a significant type of DNA damage. Given that DPCs and ICLs are both strong obstacles of DNA 
transactions and that a cohort of mammalian DNA repair mutants exhibit shared ICL and DPC sensitivities, it is 
likely that repair of these two types of lesions assumes similar molecular mechanisms in utilizing lesion bypass 
synthesis, nucleotide excision repair, and FA pathway components. The main objective of Project 3 is to study 
how cells repair DPCs via a combined proteolytic and nucleolytic mechanisms and to determine the link 
between FA pathway function and endogenous DPCs potentially arisen from gene transcription 
reprogramming. These objectives will be achieved with two specific aims: (1) Define factors and pathways 
involved in DPC repair and (2) Define FA pathway function in countering endogenous DNA-crosslinking 
lesions. Elucidation of the DPC repair mechanism will address a critical knowledge gap in DNA repair biology. 
It may also reveal the underlying mechanism of the hematopoietic manifestation of FA patients. The FA 
pathway functions primarily in resolving replication fork-blocking DNA lesions. This type of lesion is exemplified 
by DNA crosslinks most frequently generated by bifunctional alkylating chemotherapeutic modalities, such as 
cisplatin and melphalan, and by DNA-protein crosslinks produced with high frequency from ionizing radiation 
exposure. For example, clinical response of many ovarian cancers to cisplatin treatment is dictated by their FA 
pathway status. In summary, this project is aimed at delineating the molecular pathological mechanism of 
Fanconi anemia with the immediate benefit of uncovering novel therapeutic targets to improve cancer 
treatment outcomes.

## Key facts

- **NIH application ID:** 9849253
- **Project number:** 5P01CA193124-04
- **Recipient organization:** UNIVERSITY OF TX MD ANDERSON CAN CTR
- **Principal Investigator:** Junjie Chen
- **Activity code:** P01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $55,565
- **Award type:** 5
- **Project period:** 2020-02-01 → 2023-01-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9849253

## Citation

> US National Institutes of Health, RePORTER application 9849253, Project 3: Fanconi Anemia and Repair of DNA-Protein Crosslinks (5P01CA193124-04). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/9849253. Licensed CC0.

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