# "Core B" Virus RNA-seq and Bioinformatics Core

> **NIH NIH P01** · UNIVERSITY OF FLORIDA · 2020 · $214,684

## Abstract

Core B - Virus RNA-seq and Bioinformatics core
Summary
Core B will serve as a hub that brings together clinical resources, informatics expertise, and infrastructure to
facilitate the needs of P01 investigators. The unique relationship with Dr. Parsons (LSUHSC – New Orleans)
who leads the NIH-supported LSUHSC/LCRC HIV Clinical and Biospecimen Repository (UG1-CA189854;
R01CA142362; NCI AIDS Malignancies Consortium/AIDS Cancer Specimen Resource) housed at the LCRC
(Louisiana Cancer Research Consortium) will facilitate the acquisition of valuable Kaposi's sarcoma (KS) and
EBV lymphoma tumor specimens from HIV-infected patients. The existing next generation sequence analysis
core at Tulane has expertise in a wide array of computational and analysis approaches for processing high
information content biological data including a broad range of virus specific methods. The core also has close
relationships with local statistical modeling experts, pathway interaction modeling experts, and computer
scientists at Tulane (Dept of Math and the Dept of Biostatistics), LSU, and the HBCU, Xavier University of
Louisiana (the latter example being a more formal arrangement through a subcontract with Dr. Kun Zhang).
Through these relationships, the core will also serve as a conduit to bring together P01 investigators with
specific needs, to the appropriate local collaborators. Training and education of P01 PIs, students, postdocs,
and technicians are key components of the core operating philosophy. This approach will help investigators
achieve an in-depth understanding of their data while at the same time allowing the core to maintain its current
low overhead. The core has already merged the hardware capabilities at Tulane with the University of Florida
High Performance Computer Center, creating adequate computational resources to satisfy even substantial
growth in the five-year project period.

## Key facts

- **NIH application ID:** 9869867
- **Project number:** 5P01CA214091-04
- **Recipient organization:** UNIVERSITY OF FLORIDA
- **Principal Investigator:** ERIK K FLEMINGTON
- **Activity code:** P01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $214,684
- **Award type:** 5
- **Project period:** — → —

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9869867

## Citation

> US National Institutes of Health, RePORTER application 9869867, "Core B" Virus RNA-seq and Bioinformatics Core (5P01CA214091-04). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/9869867. Licensed CC0.

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