# Cytochrome P450 Enzymes from Streptomyces: Diverse Biocatalysts in Natural Products Biosynthesis

> **NIH NIH R00** · UNIVERSITY OF FLORIDA · 2020 · $249,000

## Abstract

Project Summary/Abstract
Research. The goal of this K99/R00 project is to test the hypothesis that cytochromes P450 from
Actinomycetales, a diverse subfamily of remarkable biocatalysts, may be used as a means to discover natural
products with novel functionalities. We propose to (Aim 1) investigate the sequence–structure–function
relationships of novel P450s from selected natural product biosynthetic pathways, (Aim 2) use a P450-focused
genome mining approach to discover natural products that have undergone unique P450-catalyzed
transformations, and (Aim 3) employ the newly identified P450s, and their homologues, as models for P450
enzymology and bioengineering. The multidisciplinary approach involves bioinformatics analysis, in vitro
enzymology, protein X-ray crystallography, in vivo pathway engineering, (un)natural product isolation and
structural determination. Superb preliminary data supports both the feasibility of the proposed mentored
phase in a two-year time span, and a successful transition to an independent research program. The
innovation of this application lies in leveraging the diversity of natural P450 variants from a proprietary
Actinomycetales strain collection for discovering unprecedented chemistries that imbue natural products with
new functionalities. The significance of this project is the advancement of P450 catalysis and enzymology and
the discovery of novel natural products, laying the foundation for future treatments of human diseases.
Candidate and Environment. Dr. Rudolf obtained graduate training in mechanistic enzymology and organic
synthesis from Dr. C. Dale Poulter, a preeminent terpenoid biochemist, at the University of Utah. He then
joined Dr. Ben Shen, a recognized leader in natural products discovery and biosynthesis, at The Scripps
Research Institute (TSRI), and received postdoctoral training in actinomycetes genetics and natural products
biosynthesis. His long-term career goals include establishing an independent, competitive research program
that emphasizes using natural products as inspirations for the discovery and study of novel chemistries,
enzymologies, and biologies. His immediate career goals include obtaining training in P450 enzymology and
structural biology, and in utilizing genomics for the discovery of novel enzymes and natural products. Career
development plan. This proposal was designed to ensure the realization of his career goals by providing
intellectual, technical, and professional training during the mentored phase that will lead to an effective
transition to an independent, tenure-track position. The primary mentor, Dr. Shen, and co-mentor, Dr. George
Phillips, an expert in X-ray crystallography and heme proteins, were chosen for their scientific expertise and
mentoring experience. An advisory committee, including Drs. Bradley Moore, Wilfred van der Donk, Sean
Brady, and Michael Smanski, all experts in natural products, was explicitly assembled to oversee both the
science and career devel...

## Key facts

- **NIH application ID:** 9889150
- **Project number:** 5R00GM124461-03
- **Recipient organization:** UNIVERSITY OF FLORIDA
- **Principal Investigator:** Jeffrey Daniel Rudolf
- **Activity code:** R00 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $249,000
- **Award type:** 5
- **Project period:** 2017-09-18 → 2022-02-28

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9889150

## Citation

> US National Institutes of Health, RePORTER application 9889150, Cytochrome P450 Enzymes from Streptomyces: Diverse Biocatalysts in Natural Products Biosynthesis (5R00GM124461-03). Retrieved via AI Analytics 2026-05-26 from https://api.ai-analytics.org/grant/nih/9889150. Licensed CC0.

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