# Investigating the Cellular and Biochemical Consequences of Novel Oncohistones

> **NIH NIH F32** · PRINCETON UNIVERSITY · 2020 · $65,310

## Abstract

PROJECT SUMMARY
Post-translation modification (PTM) of chromatin, consisting of DNA and histone proteins, allows for dynamic
signaling processes necessary to maintain cellular phenotypes. Mutations in the protein machinery that writes,
reads, and erases chromatin marks are frequently present in cancers and, in many cases, even drive
oncogenesis. Only recently have mutations in histones themselves been linked to cancers. These so-called
“oncohistones,” some of which act in a dominant fashion, occur with high genetic penetrance in cancers such as
pediatric gliomas (H3K27M, H3G34R), chondroblastomas (H3.3K36M), and giant cell tumors of bone
(H3.3G34W/L). The discovery of these oncohistones led us to speculate whether histone mutations exist in other
cancers. To address this question, we mined both publically available and unreported institutional sequencing
data from tumor samples, including 61 different cancer types, to generate an oncohistone database of 2,756
histone missense mutations. Among the most abundant of these new histone mutations are N-terminal arginine
mutations. Like previously identified oncohistones, these mutations are located near key regulatory PTMs on
histone tails (e.g. H3K4 and H3K27) and are themselves sites of modification (e.g. H3R2 and H3R26).
 In the proposed research, we will test the hypothesis that these histone arginine mutations, either directly
(through altered interactions with their cognate writers) or indirectly (via altered PTM crosstalks), contribute to
the development and/or progression of cancer. The goals of this research are two-fold: (1) to investigate the
cellular consequences of histone N-terminal arginine mutations and (2) to determine their effects on histone PTM
deposition. We will evaluate the cellular consequences of these novel oncohistone mutations in a high-
throughput manner in “humanized” yeast strains, assessing growth, nucleosome accessibility, and transcriptional
status. We will complement these yeast studies by expressing tagged histone mutants in mammalian cells,
performing pull-downs, and assessing changes in PTMs using proteomic techniques. To assess the biochemical
consequences of these mutations on histone PTM deposition, we will generate a DNA-barcoded histone mutant
nucleosome library and incubate it with relevant PTM writers. In instances of altered PTMs, we will perform
follow-up binding and kinetics experiments to characterize these modified interactions.
 These experiments will provide critical insight into the cellular and biochemical consequences of histone
N-terminal arginine mutations in the context of cancer. Moreover, the two experimental platforms developed
herein—one for cellular phenotypic screening and one for biochemical PTM alteration screening—will bolster
efforts by the broader epigenetics community to understand the expanding role of histone mutations in cancer
development and progression.

## Key facts

- **NIH application ID:** 9899111
- **Project number:** 5F32GM131632-02
- **Recipient organization:** PRINCETON UNIVERSITY
- **Principal Investigator:** Michelle Mitchener
- **Activity code:** F32 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $65,310
- **Award type:** 5
- **Project period:** 2019-04-01 → 2022-03-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9899111

## Citation

> US National Institutes of Health, RePORTER application 9899111, Investigating the Cellular and Biochemical Consequences of Novel Oncohistones (5F32GM131632-02). Retrieved via AI Analytics 2026-05-23 from https://api.ai-analytics.org/grant/nih/9899111. Licensed CC0.

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