# Mechanical Phenotyping of Random Periaerolar Fine Needle Aspiration-Collected Cells for Early Breast Cancer Detection

> **NIH NIH R01** · UNIVERSITY OF CALIFORNIA BERKELEY · 2020 · $529,539

## Abstract

Project Summary
 Early detection of breast cancer, especially those with high risk, would greatly improve outcomes. One
method under current evaluation for early breast-cancer detection is random periareolar fine needle aspiration
(RPFNA). RPFNA is based on the assumption that widespread cellular changes in the breast can be detected
by random-tissue sampling. Cytopathology is performed on the collected epithelial cells to determine pre-
cancerous changes; however, this analysis is only semi-quantitative.
 We propose to develop a point-of-care (POC), label-free platform to mechanically phenotype
epithelial cells collected from RPFNAs to thus determine the presence of cancer cells and/or changes
in cells that would indicate the likelihood of cancer. Our platform will be based on a novel microfluidic
method we call “mechano-Node-Pore Sensing” (mechano-NPS). Mechano-NPS utilizes a node-pore sensor
with a microfluidic contraction channel to measure simultaneously a single cell’s diameter, resistance to
compressive deformation, transverse deformation, and recovery from deformation. We have used this multi-
dimensional method of mechanical phenotyping to differentiate malignant vs. non-malignant epithelial cells,
distinguish cells treated or untreated with cytoskeletal-perturbing small molecules, and discriminate between
sub-lineages of normal primary human epithelial cells (HMECs). Importantly, we have used mechano-NPS to
identify mechanical phenotypes that correlate with chronological age and malignant progression. Thus, we
hypothesize that mechano-NPS and its ability to mechanically phenotype cells could potentially be
used for early disease detection. We intend to demonstrate the full potential of our platform ability to
distinguish normal cells from transformed ones by screening de-identified RPFNA patient samples.
 PI Lydia L. Sohn, Professor of Mechanical Engineering at UC Berkeley and Core Member of the
UCSF-UC Berkeley Joint Graduate Group in Bioengineering will lead this NIH R01 project with PI, Mark
LaBarge, who is a Professor of Population Science and an expert in breast-cancer biology at City of Hope.
Sohn will lead the development of the platform with Key Personnel, Michael Lustig, Associate Professor of
Electrical Engineering & Computer Sciences at UC Berkeley. LaBarge will provide guidance on sample choice,
experimental design, data analysis, and clinical relevance.

## Key facts

- **NIH application ID:** 9924590
- **Project number:** 5R01EB024989-04
- **Recipient organization:** UNIVERSITY OF CALIFORNIA BERKELEY
- **Principal Investigator:** Mark A LaBarge
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $529,539
- **Award type:** 5
- **Project period:** 2017-08-01 → 2022-04-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9924590

## Citation

> US National Institutes of Health, RePORTER application 9924590, Mechanical Phenotyping of Random Periaerolar Fine Needle Aspiration-Collected Cells for Early Breast Cancer Detection (5R01EB024989-04). Retrieved via AI Analytics 2026-05-29 from https://api.ai-analytics.org/grant/nih/9924590. Licensed CC0.

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