Overcoming sexually dimorphic barriers to viral gene therapy for treating genetic liver diseases

NIH RePORTER · NIH · K01 · $157,569 · view on reporter.nih.gov ↗

Abstract

PROJECT SUMMARY/ABSTRACT Research Project Summary For genetic liver diseases, the standard of care is often invasive (e.g. liver transplantation), temporary (e.g. enzyme replacement therapy), and expensive. Viral gene therapy with adeno-associated virus (AAV) is an attractive alternative as it is non-invasive, inexpensive, safe, and the therapeutic benefits can be long-term. The success of AAV gene therapy for liver diseases is critically dependent on at least two factors: (i) the ability of AAV to functionally transduce target hepatocytes; and (ii) transduction levels in affected hepatocytes must reach therapeutic levels in patients of all ages and genders. However, the field is limited by a lack of mechanistic understanding of AAV transduction that prevents the rational design of better AAV therapies, as well the differences in hepatic transduction seen between males and females. The major hypothesis addressed herein is that key host factors for AAV transduction are differentially expressed in male and female hepatocytes, and that these differences are responsible for the inconsistencies we see in treatment outcomes in the different groups. The specific aims were designed to address these needs by: (1) determining the sexually dimorphic gene expression patterns in pediatric and adult liver; (2) identifying host factors required for all stages of AAV transduction in human hepatic cells; and (3) overlaying these two independent datasets and validating target genes which both display sexual dimorphism and are required for AAV transduction in both sexes in short-term hepatocyte culture in vitro and as well as in vivo in xenotransplanted humanized liver mice. This project aims to maximize use of innovative tools to generate fundamentally new methodologies to address key problems in hepatic gene therapy and basic liver biology. Innovative tools include applying large-scale transcriptomic profiling to a compendium of pediatric and adult human livers of each gender, pairing CRISPR/Cas9 library technology with human hepatic cells to achieve libraries of singe-gene knockouts in clinically relevant cell types, and performing genome-wide loss-of-function reverse genetic screens in human hepatic cells for viral transduction factors with clinically relevant serotypes of AAV. Candidate Summary The skills, knowledge and background of Dr. Paulk make her uniquely suited to address the research questions proposed herein. Her graduate work in the world-renowned lab of Markus Grompe in applied cell and gene therapies for metabolic liver diseases resulted in 3 first-author and 3 co-author publications. In addition, she received a prestigious NIH F31 NRSA Predoctoral Fellowship and numerous academic and travel awards during this time. During Dr. Paulk's postdoctoral training in the laboratory of Mark Kay at Stanford University, she received 3 prestigious fellowships including an NIH F32 NRSA Postdoctoral Fellowship, the American Liver Foundation Hans Popper Memorial ...

Key facts

NIH application ID
9928418
Project number
5K01DK107607-05
Recipient
UNIVERSITY OF CALIFORNIA, SAN FRANCISCO
Principal Investigator
Nicole K Paulk
Activity code
K01
Funding institute
NIH
Fiscal year
2020
Award amount
$157,569
Award type
5
Project period
2016-08-04 → 2022-05-31