# Synthetic Genetic Controller Circuits to Reprogram Cell Fate

> **NIH NIH R01** · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · 2020 · $617,257

## Abstract

Synthetic genetic feedback controller circuits to reprogram cell fate
 PI: Domitilla Del Vecchio1;4
 co-PIs: James J. Collins2;4;5;6, Thorsten Schlaeger7, and Ron Weiss2;3;4
1Department of Mechanical Engineering, MIT; 2Department of Biological Engineering, MIT
 3Department of Electrical Engineering and Computer Science, MIT
 4Synthetic Biology Center, MIT; 5Broad Institute of MIT & Harvard; 6The Wyss Institute
 7 Stem Cell Transplantation Program, Boston Children's Hospital
PROJECT SUMMARY
 The past decade has seen monumental discoveries in the stem cell ﬁeld, with demonstrations that the fate of a
terminally differentiated cell, contrary to what was traditionally believed, could be reverted back to pluripotency or
directly converted to other differentiated cell types. All of a sudden, new approaches to regenerative medicine seem
within reach: lost or damaged cells could be replaced by patient-speciﬁc reprogrammed cells, thus providing on-
demand, compatible, high-quality cells of any required type. To meet this vision, the scientiﬁc community has made
tremendous efforts toward establishing robust and efﬁcient protocols for cell fate reprogramming. These protocols are
largely based on a priori ﬁxed (preﬁxed) ectopic overexpression of suitable transcription factors (TFs), with the rationale
that this overexpression could trigger transitions among the states of the gene regulatory networks (GRNs) that take
part in cell fate determination. Yet, despite a decade of remarkable progress, the efﬁciency of these protocols remains
low, the quality of produced cells is often unsatisfactory, and many potentially useful direct cell fate conversions still
seem impossible. These issues pose a formidable obstacle to the practical use of both human induced pluripotent stem
cells (hiPSCs) and transdifferentiated cells in regenerative medicine.
 Arguably, our ability to accurately and precisely steer the concentrations of GRNs' TFs within desired ranges is critical
to the success of cell fate reprogramming. Unfortunately, current protocols based on preﬁxed TFs' overexpression have
not demonstrated this critical ability. To address this problem, we propose a completely new approach to cell fate
reprogramming in this project: we replace preﬁxed overexpression with feedback overexpression of TFs, which we
realize with an in vivo synthetic genetic feedback controller circuit. Within this circuit, the overexpression level is not a
priori ﬁxed and is adjusted based on the discrepancy between desired and actual TF's concentrations. It therefore can
accurately and precisely control TFs' concentrations to desired values, independent of the endogenous GRN that also
regulates these TFs. Our research plan focuses ﬁrst on hiPSC reprogramming as a test-bed for evaluating the beneﬁt of
our approach and second on directed differentiation of hiPSCs into platelets as a directly clinically relevant application.
Speciﬁcally, in AIM 1, we propose to systematically investigate the efﬁc...

## Key facts

- **NIH application ID:** 9932388
- **Project number:** 5R01EB024591-04
- **Recipient organization:** MASSACHUSETTS INSTITUTE OF TECHNOLOGY
- **Principal Investigator:** JAMES J COLLINS
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $617,257
- **Award type:** 5
- **Project period:** 2017-09-01 → 2023-05-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9932388

## Citation

> US National Institutes of Health, RePORTER application 9932388, Synthetic Genetic Controller Circuits to Reprogram Cell Fate (5R01EB024591-04). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/9932388. Licensed CC0.

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