# Targeting innate immune pathways in breast cancers with chromosomal instability

> **NIH NIH P50** · SLOAN-KETTERING INST CAN RESEARCH · 2020 · $478,720

## Abstract

PROJECT SUMMARY/ABSTRACT
While considerable progress has been made in treating primary breast cancers, metastatic breast cancers re-
main a challenge. Metastatic breast cancer cells typically have chromosomal instability (CIN) that involves
chromosome-level alterations leading to genomic copy number abnormalities. A major challenge in targeting
breast cancers driven by CIN is the lack of known targetable alterations. We recently found that CIN pro-
motes chronic inflammatory signaling in cancer cells. As chromosomes missegregate, they often become en-
capsulated in micronuclei. Subsequent micronuclear rupture exposes genomic double-stranded DNA to the
cytosol. Cytosolic DNA activates anti-viral innate immune pathways, chief among which is cGAS-STING signal-
ing. Under normal circumstances, cGAS-STING activation promotes type I interferon and facilitates cell-
mediated immunity. Engagement of STING in normal epithelial cells induces senescence and cell death. We
have shown that cancer cells, however, are intrinsically resistant to cGAS-STING activation by virtue of their
chronic exposure to cytosolic DNA. Instead, they upregulate alternative pathways downstream of STING, such
as NF-κB signaling. The extent to which cancer cells depend on chronic inflammatory signaling is poorly un-
derstood. More importantly, how they subvert innate immune signaling to avoid immune surveillance remains
unknown. Our ongoing work reveals that cGAS-STING signaling is sequestered in cancer cells away from the
host. Furthermore, human breast tumors upregulate ENPP1, a negative regulator of cGAS-STING signaling.
ENPP1 enables immune evasion by degrading cGAMP, the second messenger produced by cGAS, only in the
extracellular space. As such ENPP1 prevents host STING activation in response to tumor-to-host cGAMP
transfer. Strikingly, pharmacologic inhibition of STING suppresses metastasis in syngeneic models of melano-
ma, breast, and colon cancers. We postulate this is because its inhibition in tumor cells outweighs its protective
role in the host. Building on this work, we will expand our pre-clinical testing of STING inhibition in breast can-
cer probing its efficacy in delaying metastasis and therapeutic resistance (Aim 1). We will then examine
whether cGAMP contributes toward the formation of an immune suppressive microenvironment through meta-
bolic breakdown in the extracellular space (Aim 2). Finally, we will develop cGAS-STING-based biomarkers in
prospectively collected tumor specimens. We will test whether the status of cGAS-STING signaling and
ENPP1 levels can predict response to neoadjuvant chemotherapy and atezolizumab, an immunotherapeutic
recently approved for the treatment of metastatic breast cancer (Aim 3). Our work addresses a clinically unmet
need by targeting a subset of breast cancers with CIN and for which there are limited therapeutic options. If
successful it will provide pre-clinical rationale for first-in-human testing of STING inhibitors for the...

## Key facts

- **NIH application ID:** 9937337
- **Project number:** 1P50CA247749-01
- **Recipient organization:** SLOAN-KETTERING INST CAN RESEARCH
- **Principal Investigator:** Samuel F Bakhoum
- **Activity code:** P50 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $478,720
- **Award type:** 1
- **Project period:** 2020-08-13 → 2025-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9937337

## Citation

> US National Institutes of Health, RePORTER application 9937337, Targeting innate immune pathways in breast cancers with chromosomal instability (1P50CA247749-01). Retrieved via AI Analytics 2026-05-23 from https://api.ai-analytics.org/grant/nih/9937337. Licensed CC0.

---

*[NIH grants dataset](/datasets/nih-grants) · CC0 1.0*
