# Elucidating KRAS-specific vulnerabilities in pancreatic cancer

> **NIH NIH K08** · YALE UNIVERSITY · 2020 · $175,284

## Abstract

PROJECT SUMMARY/ABSTRACT
Despite significant therapeutic advances in other cancers, treatment of pancreatic ductal adenocarcinoma
(PDAC) has improved only modestly over the past several decades. Consequently, pancreatic cancer remains
the fourth leading cause of cancer death in the United States and a major cause of morbidity and mortality
worldwide. Mutation of the proto-oncogene KRAS is a hallmark of PDAC, occurring in >90% of cases. Studies
in animal models and cell lines have suggested that mutant KRAS is important for both the initiation and
maintenance of PDAC, making KRAS an attractive target for therapy. Unfortunately, efforts to directly target
KRAS have been thwarted by several unique features of the mutant protein, making KRAS “undruggable” to
date. Furthermore, current strategies to inhibit putative downstream signaling pathways have been largely
unsuccessful. Given the high prevalence of KRAS mutations in not only PDAC but also cancers of the lung and
colon, the development of new approaches to target KRAS mutant cancers remains a significant unmet need.
The long-term goal of the proposed research is to improve our understanding of KRAS biology to facilitate the
development of novel therapeutic strategies in PDAC and other KRAS mutant cancers. Our preliminary studies
revealed that partial or complete inhibition of mutant KRAS induced marked and reversible changes in gene
expression, cell signaling, and drug sensitivity, suggesting that KRAS fosters a specific cell state, potentially
amenable to targeted inhibition. In this proposal, we leverage novel PDAC cell lines in which KRAS has been
inactivated by CRISPR/Cas-mediated genome editing, a lentiviral cDNA library permitting expression of a
diverse array of KRAS mutant variants, and CRISPR-based genome-wide screening libraries to interrogate key
KRAS-relevant functional pathways and elucidate synthetic lethal interactions with KRAS mutation.
Specifically, we propose to re-express different KRAS mutant variants to identify variant-specific effectors
through transcriptional and biochemical profiling, offering an unprecedented evaluation of KRAS mutant
variants in cancer cells. In parallel, we plan to elucidate unique genetic dependencies in cells harboring or
lacking KRAS function using CRISPR-based screening. Together, these approaches are likely to reveal novel
targetable pathways and proteins in KRAS mutant cells, which we will validate in additional cell lines in vitro
and transplant and autochthonous models in vivo.
The proposed research strategy is part of an extensive training program designed to facilitate my transition to
becoming an independent investigator in basic and translational cancer biology. The main experiments will be
conducted in the Jacks laboratory at the Koch Institute for Integrative Cancer Research at MIT under the
guidance of Dr. Tyler Jacks, an international leader in KRAS biology and mouse models of cancer. Co-
mentorship on clinical and translational scien...

## Key facts

- **NIH application ID:** 9941065
- **Project number:** 5K08CA208016-06
- **Recipient organization:** YALE UNIVERSITY
- **Principal Investigator:** Mandar Deepak Muzumdar
- **Activity code:** K08 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $175,284
- **Award type:** 5
- **Project period:** 2016-07-01 → 2021-12-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9941065

## Citation

> US National Institutes of Health, RePORTER application 9941065, Elucidating KRAS-specific vulnerabilities in pancreatic cancer (5K08CA208016-06). Retrieved via AI Analytics 2026-05-25 from https://api.ai-analytics.org/grant/nih/9941065. Licensed CC0.

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