IFN-y drives Treg fragility through DNA methylation of the Treg-specific de-methylated regions

NIH RePORTER · NIH · F31 · $45,520 · view on reporter.nih.gov ↗

Abstract

PROJECT SUMMARY Regulatory T cells (Tregs) are characterized by expression of master regulator, Foxp3, and their ability to limit autoimmunity and maintain peripheral tolerance. However, these cells also play a deleterious role in suppressing the anti-tumor response. Our lab found that deletion of neuropilin-1 (Nrp1) on Tregs results in decreased suppression of the anti-tumor response without compromising peripheral tolerance. We also found that these cells change their phenotype, such as secretion of IFN and loss of suppressive capability, but maintain Foxp3 expression, which we coined as Treg fragility. We have also shown that IFN-mediated Treg fragility is required for a productive immunotherapeutic response to anti-PD1 immune checkpoint blockade in mice. Interestingly, we found that IFN causes DNA methylation of an enhancer element that exists in the Foxp3 locus, the conserved non-coding sequence 2, or CNS2 in vitro. We do not yet know if IFN causes re-methylation of other Treg-specific de-methylated regions (TSDRs). It is possible that this re-methylation could contribute to Treg fragility. This research proposes to elucidate how IFN contributes to Treg fragility in two specific aims. First, it would be of interest to understand how IFN-mediated DNA re-methylation occurs. We will examine if downstream modulator STAT1 can modulate levels of the DNA methyltransferase enzymes (DNMT1, DNMT3a, and DNMT3b) as well as differential binding to TSDR loci. Next, we will elucidate if IFN causes re-methylation of TSDR loci in vivo after anti-PD1 therapy. Moreover, we will elucidate if CD8 T cells are the source of the IFN after treatment. These proposed studies will give insight on the mechanisms of Treg fragility.

Key facts

NIH application ID
9969037
Project number
5F31CA236337-02
Recipient
UNIVERSITY OF PITTSBURGH AT PITTSBURGH
Principal Investigator
Rebekah Dadey
Activity code
F31
Funding institute
NIH
Fiscal year
2020
Award amount
$45,520
Award type
5
Project period
2019-07-01 → 2021-06-30