# Improving combination chemotherapy of tuberculosis: a computational approach

> **NIH NIH R01** · COLORADO STATE UNIVERSITY · 2020 · $421,829

## Abstract

Project Summary/Abstract
Tuberculosis (TB) is a widespread bacterial infectious disease that kills nearly 1.5 million people annually. While
effective drug therapy for TB has been available for more than 50 years, there is a substantial number of drug
resistant clinical cases that are signiﬁcantly impacting public health. Drug regimens for TB are designed to limit
the emergence of resistance by using multiple drugs concurrently (combination therapy) which greatly increases
the time and cost of their development. While the U.S. Food and Drug Administration (FDA), in partnership with
the recently formed Critical Path to New TB Drug Regimens (CPTR) initiative, now provides regulatory guidance
for developing new drug combinations as a single unit, and while several new anti-TB regimens are in clinical
testing under this FDA guidance, there are critical questions about how to establish the optimal dose of
each individual drug within these new combination regimens.
 Dosage regimens for new anti-TB drug combinations are generally based on ﬁnding an optimal dose for
every single drug in the preclinical stage, and through Phase II dose-ranging clinical trials. While tailoring the
doses of each individual drug within a drug combination could potentially yield a more effective and better
tolerated treatment regimen, the exponential increase in the in vitro methodologies, animal efﬁcacy studies, and
clinical testing required to identify such doses for combinations of three or more drugs needed for TB would be
prohibitively expensive. To address this gap in TB drug development we propose a new approach to dosage
regimen design of combination drug therapies that consists of (1) the use of conventional preclinical and
clinical measurements to inform a mathematical dose-response model for a speciﬁed drug combination in TB
patients, (2) the integration of this mathematical model with a biologically inspired genetic algorithm to design
dosage regimens in a manner analogous to natural selection, and (3) the empirical evaluation of these optimized
regimens in experimental TB-infection models.
 To establish our approach with a clinically relevant example, we will design optimized dosage regimens
for the new anti-TB combination pretomanid + moxiﬂoxacin + pyrazinamide (PaMZ); a promising and urgently
needed treatment option for patients with multidrug resistant (MDR) TB, currently assessed in a Phase II clinical
trial. There is a large amount of high quality preclinical and clinical data for this TB drug combination that will
provide a sound evidence base to develop our computational framework and to test our conclusions. Successful
completion of the proposed aims will establish new methods and tools to better translate preclinical studies
to clinical dosage regimen design for future anti-TB combinations. While motivated by the needs of TB drug
development, this project includes innovations that apply to the treatment of other diseases such as cancer,
human immunodeﬁci...

## Key facts

- **NIH application ID:** 9977085
- **Project number:** 5R01AI125454-05
- **Recipient organization:** COLORADO STATE UNIVERSITY
- **Principal Investigator:** Michael A. Lyons
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $421,829
- **Award type:** 5
- **Project period:** 2016-08-01 → 2023-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9977085

## Citation

> US National Institutes of Health, RePORTER application 9977085, Improving combination chemotherapy of tuberculosis: a computational approach (5R01AI125454-05). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/9977085. Licensed CC0.

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