# KOMP2-Phase 2 Production and Phenotyping by the DTCC Consortium

> **NIH NIH UM1** · UNIVERSITY OF CALIFORNIA AT DAVIS · 2020 · $6,058,421

## Abstract

KOMP2-Phase2 Production and Phenotyping by the DTCC Consortium
ABSTRACT
This application is to competitively renew funding for the DTCC Consortium’s Phase2 participation in the
Knockout Mouse Production and Phenotyping (KOMP2) Project. Member centers of the DTCC Consortium
include the University of California Davis (UCD; lead institution), The Centre for Phenogenomics (TCP) in
Toronto, the Children’s Hospital Oakland Research Institute (CHORI), and Charles River Laboratories
International Inc (CRL). We propose to leverage our experience and continue to use well-tested coordinated
management, strategies, protocols, and processes successfully implemented for KOMP2-Phase1 to increase,
expand, and enhance activities for KOMP2-Phase2. In KOMP2-Phase1, the DTCC completed (or is on track to
complete by the end of Phase1) all established goals and achieve all metrics (e.g., accelerated microinjection
of ES cell clones, increased production rate of germline mutants, early completion of production timeline, on-
track for completion of phenotyping) that exceed objectives and goals required for the scope of work we
propose by the DTCC in KOMP2-Phase2. In this renewal, the DTCC proposes to phenotype male and female
cohorts for at least 1,500 mutant homozygous (HOM) or heterozygous (HET) mouse lines produced using
Cas9 RNA-guided nuclease (Cas9 RGN) and corresponding age and sex –matched wildtype (WT) controls in
3 phenotyping pipelines (Embryo, Juvenile, and Adult) using all IMPC-required and several optional IMPReSS-
established tests across multiple organ systems. After applying center-based quality assurance of processes,
and quality control of products (mice and data), all data (including meta-data) will be uploaded without delay to
the Data Coordination Center (DCC) and then the Mouse Phenotyping Informatics Infrastructure (MPI2) for
public access through the IMPC web portal (www.impc.org). To enhance the efficiency of generating mouse
lines and data, DTCC member Centers will conduct technology development projects to improve and increase
efficiency of production (e.g. high-efficiency RGN-mediated targeting, lacZ knockin insertion) and pilot
phenotyping tests (e.g. automated home cage monitoring and micronucleus [genome instability]) to establish
their added-value, reproducibility, and cost-effectiveness in our Juvenile and Adult Pipelines. Phenotyping
technology development activities will include a novel quantitative kit-based proteomic assay, and metabolomic
profiling of mutant mouse lines that promise to add significant scientific value and increase research utility of
phenotyping data. In addition, the DTCC will actively engage the scientific community by seeking nominations
for genes to study (e.g., Adult Pipeline), prioritize responses to requests for KOMP2 mice while production and
phenotyping is in progress and after deposition into the Mutant Mouse Resource and Research Center
(www.mmrrc.org), and provide value-added services and collaborations...

## Key facts

- **NIH application ID:** 9982452
- **Project number:** 5UM1OD023221-10
- **Recipient organization:** UNIVERSITY OF CALIFORNIA AT DAVIS
- **Principal Investigator:** KC KENT LLOYD
- **Activity code:** UM1 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $6,058,421
- **Award type:** 5
- **Project period:** 2011-09-16 → 2022-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9982452

## Citation

> US National Institutes of Health, RePORTER application 9982452, KOMP2-Phase 2 Production and Phenotyping by the DTCC Consortium (5UM1OD023221-10). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/9982452. Licensed CC0.

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