# The effect of developmental iron deficiency on TET proteins and DNA hydroxymethylation

> **NIH NIH F30** · UNIVERSITY OF MINNESOTA · 2020 · $30,398

## Abstract

PROJECT SUMMARY
Fetal-neonatal iron deficiency (ID) has a lasting negative impact on neurodevelopment, resulting in significant
cognitive, socio-emotional, and learning and memory deficits in adulthood. Given that ID is the most common
micronutrient deficiency worldwide, and that pregnant women and young children are disproportionately
affected, it presents a significant public health concern. Preclinical models have demonstrated that the
developing hippocampus is particularly affected by ID, and that the deleterious neurodevelopmental and
behavioral outcomes that follow are associated with dysregulation of hippocampal gene expression. Affected
genes include many that are important for neurodevelopment and synaptic plasticity such as Bdnf, Dlg4 (PSD-
95), and Vamp1. If developmental ID is corrected by iron repletion within a critical period, correction of these
deficits is possible. However, if iron repletion occurs outside of the critical period, the phenotypic and gene
expression changes persist into adulthood despite correction of the deficiency. While changes in gene
expression can be understood as the proximate cause of the ID neurocognitive phenotype, it is still unclear
what the ultimate cause is. As such, there is a gap in our understanding of how developmental ID drives
hippocampal gene expression changes. A potential mechanism by which iron could enact these changes is
through Ten-Eleven Translocation (TET) proteins, a family of iron-dependent hydroxylases that generate the
epigenetic modification 5-hydroxymethylcytosine. Epigenetic modifications such as DNA hydroxymethylation
have the ability to stably influence gene expression throughout the lifespan, and are known to be labile to
environmental influences. Of particular relevance, 5-hydroxyethylcytosine is more abundant in the brain than
any other tissue type, and it increases in enrichment as neurodevelopment progresses, particularly in genes
critical for neuronal development and function. The central hypothesis of this proposal is that dysregulation of
TET protein activity and DNA hydroxymethylation by ID drive gene expression changes in hippocampal
neurons that contribute to the long-term neurocognitive phenotype of developmental ID. To test this
hypothesis, the following specific aims are proposed: 1) Determine how ID alters TET activity and
hydroxymethylation of neurons in an in vitro model of hippocampal neurodevelopment, and 2) Determine the
effect of developmental ID and subsequent iron repletion on hydroxymethylation in the developing mouse
hippocampus. Completion of these aims will contribute to our long-term goal of understanding the cellular and
molecular underpinnings of hippocampal dysfunction following developmental ID. Because the standard
therapy of iron repletion incompletely rescues the neurodevelopmental phenotype of ID, there is a need for
better therapeutic options. By better understanding the underlying mechanisms of ID-related hippocampal
dysfunction, it may be...

## Key facts

- **NIH application ID:** 9983762
- **Project number:** 5F30HD093285-04
- **Recipient organization:** UNIVERSITY OF MINNESOTA
- **Principal Investigator:** Amanda Kathryn Barks
- **Activity code:** F30 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $30,398
- **Award type:** 5
- **Project period:** 2017-08-28 → 2021-08-27

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9983762

## Citation

> US National Institutes of Health, RePORTER application 9983762, The effect of developmental iron deficiency on TET proteins and DNA hydroxymethylation (5F30HD093285-04). Retrieved via AI Analytics 2026-05-26 from https://api.ai-analytics.org/grant/nih/9983762. Licensed CC0.

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