# Metagenomic and Metabolomic Analysis of the Structure and Function of the Human Gut Microbiome in Congenital Heart

> **NIH NIH R03** · UNIVERSITY OF ARIZONA · 2020 · $76,750

## Abstract

PROJECT SUMMARY
Approximately 40,000 infants are born each year in the United States with congenital heart defects (CHD), and
heart defects are the leading cause of birth defect-related deaths in the United States(1). While advances in
surgical treatment and post-operative care have reduced in-hospital mortality for children born with CHD, 1/3 of
infants continue to suffer morbidity from post-operative multiple organ dysfunction syndrome (MODS)(2, 3).
Emerging data suggests a role for intestinal dysbiosis and a pro-inflammatory metabolome in the pathogenesis
of post-operative MODS(4, 5). In two case reports of adult ICU patients with MODS, fecal microbiome
transplantation to correct dysbiosis resulted in resolution of MODS. A multi-omics approach may provide
insight into host-microbe interactions contributing to MODS. In children with CHD, intestinal microbiome
dysbiosis is prevalent pre-operatively, and in pilot data from Dr. Typpo's NIDDK K23 award project, we found
that post-operative MODS was associated with a pattern of dysbiosis previously reported in adult ICU patients:
decreased relative abundance of Firmicutes and Actinobacteria and an increased relative abundance of
Bacteroidetes and Proteobacteria(5). Through PICRUSt analysis to predict functional composition of the
dysbiotic metagenome(6), we identified twenty-five metabolic pathways associated with MODS and one
protective pathway. The goal of this R03 proposal is to complement and expand Dr. Typpo's K23 program of
research from pure structural analysis (what microbes are present) of intestinal microbial populations to
functional analysis (what they are doing) of microbial populations via the following 3 specific aims. Specific
Aim 1: Characterize the pre- and post-operative fecal microbiome in infants with and without post-operative
MODS using whole genome shotgun metagenomics sequencing to identify if pre-operative microbiome is
associated with post-operative MODS. Specific Aim 2 Identify differentially abundant fecal and urinary
metabolites of infants with and without post-operative MODS to identify associations between the pre-operative
metabolome and post-operative MODS. Specific Aim 3: Derive mechanistic models to explain how observed
pre-operative dysbiosis and host-microbe interactions contribute to the development of post-operative MODS
by combining clinical metadata, metagenomics (Aim1), and metabolomics (Aim2) output. This proposal is
significant, because we will address gaps in knowledge regarding the functional consequences of intestinal
dysbiosis in children who develop MODS after surgical correction of CHD. This proposal is innovative, through
use of combined metagenomics and metabolomics approaches to derive mechanistic pathways which
contribute to MODS. We may identify novel microbial targets to reduce the incidence or severity of post-
operative MODS. This proposal, in combination with Dr Typpo's career development award (K23) will provide
her with the training, expe...

## Key facts

- **NIH application ID:** 9985823
- **Project number:** 5R03DK118303-02
- **Recipient organization:** UNIVERSITY OF ARIZONA
- **Principal Investigator:** Katri Vanamo Typpo
- **Activity code:** R03 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $76,750
- **Award type:** 5
- **Project period:** 2019-08-01 → 2022-11-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9985823

## Citation

> US National Institutes of Health, RePORTER application 9985823, Metagenomic and Metabolomic Analysis of the Structure and Function of the Human Gut Microbiome in Congenital Heart (5R03DK118303-02). Retrieved via AI Analytics 2026-05-26 from https://api.ai-analytics.org/grant/nih/9985823. Licensed CC0.

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