# Prospective Validation of Prognostic and Predictive Molecular tests in Mesothelioma

> **NIH NIH R01** · BRIGHAM AND WOMEN'S HOSPITAL · 2020 · $302,092

## Abstract

Malignant pleural mesothelioma (MPM), a devastating asbestos-induced cancer, has <10% 5-yr survival.
Treatments are few and limited. Aggressive surgery (extra-pleural pneumonectomy (EPP) or
pleurectomy/decortication (PD)) followed by chemotherapy is effective in a subset of patients, yielding 20%-30%
5-yr survival, but identifying the patients who will benefit from this treatment is a significant challenge. Surgery
of any type for MPM is associated with considerable morbidity and some mortality. The primary goal is to
enhance and validate prognostic biomarkers and a robust risk score to identify only those patients who will be
long-term survivors to undergo surgery. We previously developed and prospectively validated a 4-factor
pathology staging score (MPS=MPM Prognostic Score) that is the best reliable prognostic test after surgery for
MPM. We extended this effort to develop a pre-treatment clinical prognostic score to inform patients in their
decisions regarding therapy. Herein we propose for multicenter clinical evaluation this risk score (MRiS = MPM
Risk Score) based on 4 simple tests (Chest CT, CBC, 2 molecular tests on pleural biopsy). We will leverage 4
unique prospective patient cohorts (total: 1101 patients) with clinical data and specimens for the proposed work.
These cohorts constitute a one-of-a-kind resource that also allows to generate, evaluate and validate new
candidate biomarkers. In a recent study published in Nat. Genetics, we defined 4 robust, distinct and more
homogeneous expression clusters consistent with the epithelial to mesenchymal transformation and
demonstrated that expression cluster I (defined by CLDN15/VIM ratio) can be a surrogate for the histological-
subtype-diagnosis in MRiS and we propose to expand this to the other clusters. We also constructed and
validated a derivative of a simple existing blood test (neutrophil/lymphocyte ratio) that is prognostic and a part of
MRiS representing the immune response. We hypothesize that 1) adding new genetic and clinical test
information to our current prognostic models will enable more accurate allocation of MPM patients into more
homogeneous pre-treatment subpopulations, allowing for rational assignment of therapies; 2) our new prognostic
models can be successfully transferred to FFPE and be used clinically. The Aims are: 1. Prospectively validate
a new pre-treatment prognostic algorithm to predict survival for MPM patients, by enrolling all new patients with
MPM into a clinical trial where the MRiS is determined prior to treatment and outcome is measured by follow up.
We will also: a. Determine test and specimens properties for the molecular tests in pleural biopsies; and
b. Develop, explore and test new diagnostic, prognostic and predictive signatures for MPM based on expression
clusters membership and response to specific therapies. 2. Transfer the molecular tests to FFPE preserved
pleural biopsy samples and determine concordance, specimen and test properties of propose...

## Key facts

- **NIH application ID:** 9987537
- **Project number:** 5R01CA120528-14
- **Recipient organization:** BRIGHAM AND WOMEN'S HOSPITAL
- **Principal Investigator:** RAPHAEL BUENO
- **Activity code:** R01 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $302,092
- **Award type:** 5
- **Project period:** 2006-04-07 → 2022-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9987537

## Citation

> US National Institutes of Health, RePORTER application 9987537, Prospective Validation of Prognostic and Predictive Molecular tests in Mesothelioma (5R01CA120528-14). Retrieved via AI Analytics 2026-05-23 from https://api.ai-analytics.org/grant/nih/9987537. Licensed CC0.

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