# Interferometric 3D Super-Resolution Imaging and Structure and Stoichiometry Mapping in Living Cells

> **NIH NIH R35** · PURDUE UNIVERSITY · 2020 · $374,123

## Abstract

Abstract
We are in an exciting era of biology where the inner workings of cells can be explored by rapidly developing
imaging methods. Fluorescence microscopy has two major advantages: labeling specificity and live cell
compatibility. However, it is limited by diffraction to approximately 250 nm resolution. The recent advent of
single molecule switching nanoscopy (SMSN, also known as PALM/STORM/FPALM) has overcome this
fundamental limit by stochastically switching single dyes on and off such that their emission events are
separated in time. This allows their center positions to be localized with high precision in space leading to a
reconstructed super resolved image with a resolution down to ~25 nm. However, its biological application is
limited for two reasons: (1) SMSN applications are typically limited to fixed samples due to the poor temporal
resolution and (2) the application been limited to structures close to the coverslip in thin samples because of its
inferior resolution in the depth direction (z) and rapidly deteriorating resolution in thick samples. Further, SMSN
generates thousands to millions of precise single molecule positions per dataset - a large amount of
information rarely explored due to the lack of data quantification methods. Overcoming these hurdles will allow
visualization and quantification of nanostructures in living cells, determine the stoichiometry of fluorescently
tagged proteins and thus drastically expand the breadth of SMSN applications.
 We propose to (1) develop interferometric SMSN for ultra-high resolution imaging in live cells and thick
samples capturing 3D live cell dynamics through an imaging depth up to 50 µm with isotropic 5-10 nm
resolution; (2) develop structure and stoichiometry mapping in space, time and multiple color to build high-
resolution 3D models of macromolecular complexes and large protein assemblies in live cell; and (3) further
improve the resolution by another order of magnitude (~1 nm precision) of the reconstructed model by a high-
content system allowing statistical quantification over thousands of cells (~3000 cells per hour). Applying these
developments, we will study the distinct molecular organization and function of three different myosins during
cytokinesis in live fission yeast and neuronal motility focusing on the growth cones in live neuron.
 The proposed research will, for the first time, make ultra-high resolution visualization of cells possible in
thick and live samples, allow building highly-resolved and evolving structure and stoichiometry models of
macromolecular assemblies and protein clusters in vivo and further categorizing them based on their live-cell
context. This allows us to determine the  organization of myosin molecules in vivo, visualize their interaction
with actin network and study their function in tension generation within the cytokinetic ring during cell division.
 The proposed research is enthusiastically supported by my close collaboration with Martin B...

## Key facts

- **NIH application ID:** 9988430
- **Project number:** 5R35GM119785-05
- **Recipient organization:** PURDUE UNIVERSITY
- **Principal Investigator:** Fang Huang
- **Activity code:** R35 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $374,123
- **Award type:** 5
- **Project period:** 2016-08-01 → 2021-07-31

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9988430

## Citation

> US National Institutes of Health, RePORTER application 9988430, Interferometric 3D Super-Resolution Imaging and Structure and Stoichiometry Mapping in Living Cells (5R35GM119785-05). Retrieved via AI Analytics 2026-06-03 from https://api.ai-analytics.org/grant/nih/9988430. Licensed CC0.

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