# Developing plant synthetic biology platforms to elucidate the role of natural products

> **NIH NIH R00** · UNIVERSITY OF CALIFORNIA AT DAVIS · 2020 · $1

## Abstract

Project Summary and Abstract
Candidate and Environment
 During my graduate career at UC Berkeley, I became interested in the evolution and engineering of metabolic
pathways, primarily relating to photosynthesis. It was through this work that I became familiar with the field of synthetic
biology and integrated it into my graduate work through engineering synthetic carbon fixation pathways to improve
photosynthetic yield and the synthesis of phylogenetically predicted enzymes that existed hundreds of millions of years
ago. Excited about the prospects of synthetic biology in plants, I received a Life Sciences Research Foundation
postdoctoral fellowship and joined Dr. Dominique Loqué's lab at the Joint BioEnergy Institute and Lawrence Berkeley
National Laboratory, where I have focused on developing plant synthetic biology tools to facilitate metabolic engineering
in plants. Although I have spent my postdoctoral career focused on tool development, I am interested in the application of
these technologies to engineer novel natural product biosynthetic pathways with unique biological functions. My long-
term career goals involve the development of synthetic biology tools and platforms for enabling basic discovery and
translational research involving plant natural products and metabolic engineering. My diverse research experiences
provide a strong foundation to attain this goal. Although I have spent much of my career focusing on primary carbon
metabolism and photosynthesis, I have not yet had any training in secondary metabolism and elucidation of natural
product biosynthetic pathways. Thus, my immediate goal is to obtain training from the K99/R00 award under the
guidance of experts in the field to successfully bridge my interests in synthetic biology and plant natural products and
ultimately transition to an independent faculty position.
 My mentoring team is composed of experts in disparate yet complementary fields, allowing me to receive training
in their respective niches and organically build my own independent research program. I will be co-mentored by Dr.
Dominique Loqué (Lawrence Berkeley National Lab/UC Berkeley), an expert in plant synthetic biology, Dr. Elizabeth
Sattely (Stanford), a leading expert in plant secondary metabolism, and Dr. Jay Keasling (Lawrence Berkeley National
Lab/UC Berkeley), a pioneer in microbial synthetic biology and metabolic engineering. I will receive further training and
guidance form Dr. Justin Sonnenburg (Stanford) as a collaborator and expert studying the role of small molecules on the
intestinal microbiota. I will have regular one-on-one meetings with my advisory committee to ensure that I stay on track
with my career development and research progress to obtain an independent faculty position.
 The proximity between both Berkeley and Stanford will enable me to take advantage of the excellent academic
environment of both institutions, providing opportunities to meet visiting scholars, attend seminars, and take cou...

## Key facts

- **NIH application ID:** 9990696
- **Project number:** 5R00AT009573-04
- **Recipient organization:** UNIVERSITY OF CALIFORNIA AT DAVIS
- **Principal Investigator:** Patrick Shih
- **Activity code:** R00 (R01, R21, SBIR, etc.)
- **Funding institute:** NIH
- **Fiscal year:** 2020
- **Award amount:** $1
- **Award type:** 5
- **Project period:** 2017-08-01 → 2021-06-30

## Primary source

NIH RePORTER: https://reporter.nih.gov/project-details/9990696

## Citation

> US National Institutes of Health, RePORTER application 9990696, Developing plant synthetic biology platforms to elucidate the role of natural products (5R00AT009573-04). Retrieved via AI Analytics 2026-05-22 from https://api.ai-analytics.org/grant/nih/9990696. Licensed CC0.

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