Bioinformatics approaches to solve the "Missing Driver" problem in solid tumors

NIH RePORTER · NIH · R50 · $113,415 · view on reporter.nih.gov ↗

Abstract

ABSTRACT Cancers are extremely complex and variable, however a common feature appears to be the presence of critical driver events (e.g. genetic mutations in tumor suppressors) that drive tumor formation and progression. Key driver events, such as mutations in TP53, have been identified in many well-studied tumors. However, many human solid tumors do not have clearly identified driver events, even after common oncogenes and tumor suppressors have been systematically examined. We have termed this the “missing driver” problem. Our bioinformatics based approach to identify cancer driver events is to use innovative analyses of forward genetic screens for tumor formation in mice to identify genomic locations to systematically and exhaustively investigate within the increasing amounts of human cancer tumor genome-wide data in both publicly available as well as data generated within our lab. We expect to identify novel driver events and that the elucidation of the complete spectrum of tumor driver events will be extremely important to personalized approaches to cancer.

Key facts

NIH application ID
9993405
Project number
5R50CA211249-05
Recipient
UNIVERSITY OF MINNESOTA
Principal Investigator
Aaron L Sarver
Activity code
R50
Funding institute
NIH
Fiscal year
2020
Award amount
$113,415
Award type
5
Project period
2016-09-15 → 2021-08-31