Core C: Proteomics and Analytical Biochemistry Core

NIH RePORTER · NIH · P01 · $330,514 · view on reporter.nih.gov ↗

Abstract

Core C: Summary/Abstract The proteomics and analytical biochemistry core C provides essential technical support for all three of the projects in our program. The main functions of Core C are to provide: (i) support for determining post- translational modifications (PTM) in cardiac tissue (human from Core B, rodent and rabbit) with an emphasis on sarcomeric proteins utilizing 2D-DIGE, 2D-PAGE and Pro-Q staining; (ii) separation of cardiac proteins or peptides in solution by OFFGEL fractionation; (iii) mass spectrometric (MS) analysis support to identify proteins and their (PTMs) along with multiple reaction monitoring (MRM) for targeting specific PTMs; (iv) support for identifying reactive oxygen species (ROS) induced protein modifications by Oxyblot, 2D-diagonal gels, glutathionylation Western blot assays and biotin switch assays; (v) support for determining global changes in both protein abundance and PTMs by iTRAQ/TMT labeling of either the whole proteome or sub-proteomic fractions. Core C also prepares sub-proteomic fractionation of the sarcomeric proteins or whole heart homogenates for proteomic characterization. To ensure productivity and progress, Core C support provides state-of-the-art facilities and equipment such as the Orbitrap Velos Pro and the AB Sciex 6500 Q-TRAP for advanced proteomic analysis required by all projects in the program. Core C support is critical to approach for aims in each of the projects and thus is indispensable for the overall success of the program.

Key facts

NIH application ID
9941108
Project number
5P01HL062426-20
Recipient
UNIVERSITY OF ILLINOIS AT CHICAGO
Principal Investigator
Chad Michael Warren
Activity code
P01
Funding institute
NIH
Fiscal year
2020
Award amount
$330,514
Award type
5
Project period
— → 2023-05-31